Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
PRKDCP78527 AL805961.1-203ENST00000641078 1258 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 SLC25A24-204ENST00000569674 2357 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC11.44□□□□□ -0.58
PRKDCP78527 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC11.44□□□□□ -0.58
PRKDCP78527 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.44□□□□□ -0.58
PRKDCP78527 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 TNXA-203ENST00000507684 2038 ntBASIC11.43□□□□□ -0.58
PRKDCP78527 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 AL354877.1-201ENST00000424412 413 ntBASIC11.43□□□□□ -0.58
PRKDCP78527 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.43□□□□□ -0.58
PRKDCP78527 TMCO5B-205ENST00000530020 894 ntBASIC11.43□□□□□ -0.58
PRKDCP78527 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 HKR1-225ENST00000592168 566 ntTSL 4 BASIC11.43□□□□□ -0.58
PRKDCP78527 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 AC009113.1-201ENST00000570267 2443 ntBASIC11.43□□□□□ -0.58
PRKDCP78527 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.43□□□□□ -0.58
PRKDCP78527 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC11.43□□□□□ -0.58
PRKDCP78527 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
PRKDCP78527 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PRKDCP78527 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.43□□□□□ -0.58
PRKDCP78527 AL645728.1-201ENST00000366221 2101 ntBASIC11.43□□□□□ -0.58
PRKDCP78527 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC11.43□□□□□ -0.58
PRKDCP78527 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.42□□□□□ -0.58
PRKDCP78527 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
PRKDCP78527 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 NOC2LP1-201ENST00000450578 752 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 GAPDHP40-201ENST00000505218 1006 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC11.42□□□□□ -0.58
PRKDCP78527 AC013355.1-201ENST00000562625 723 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.42□□□□□ -0.58
PRKDCP78527 BNIP3P13-201ENST00000599968 566 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 AC107373.2-201ENST00000607735 490 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 AC105137.3-201ENST00000617588 984 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PRKDCP78527 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
PRKDCP78527 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.42□□□□□ -0.58
PRKDCP78527 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
PRKDCP78527 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC11.42□□□□□ -0.58
PRKDCP78527 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
PRKDCP78527 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.42□□□□□ -0.58
PRKDCP78527 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC11.42□□□□□ -0.58
PRKDCP78527 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
PRKDCP78527 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
PRKDCP78527 AC073413.1-201ENST00000603927 732 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 MEG3_2.1-201ENST00000611456 105 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 AC091544.8-201ENST00000619490 361 ntBASIC11.42□□□□□ -0.58
PRKDCP78527 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC11.42□□□□□ -0.58
PRKDCP78527 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PRKDCP78527 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms