Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 AL118506.1-201ENST00000601296 3082 ntBASIC12.23□□□□□ -0.45
HIST1H2BCP62807 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 JTB-203ENST00000368589 1216 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 UNC93B4-201ENST00000505679 747 ntBASIC12.23□□□□□ -0.45
HIST1H2BCP62807 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 AC109462.3-201ENST00000573934 613 ntBASIC12.23□□□□□ -0.45
HIST1H2BCP62807 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 AC019129.2-201ENST00000609837 1235 ntBASIC12.23□□□□□ -0.45
HIST1H2BCP62807 AC130371.2-201ENST00000619443 611 ntBASIC12.23□□□□□ -0.45
HIST1H2BCP62807 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 MST1P2-201ENST00000457982 2291 ntBASIC12.23□□□□□ -0.45
HIST1H2BCP62807 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 LINC01144-201ENST00000626198 1710 ntBASIC12.23□□□□□ -0.45
HIST1H2BCP62807 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H2BCP62807 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.22□□□□□ -0.45
HIST1H2BCP62807 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 AC096633.1-201ENST00000422446 749 ntBASIC12.22□□□□□ -0.45
HIST1H2BCP62807 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 PCGF3-213ENST00000620529 1899 ntBASIC12.22□□□□□ -0.45
HIST1H2BCP62807 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H2BCP62807 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms