Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 HYMAI-201ENST00000635591 3347 ntBASIC16.04■□□□□ 0.16
CDKN2DP55273 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.04■□□□□ 0.16
CDKN2DP55273 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.04■□□□□ 0.16
CDKN2DP55273 AL671277.1-201ENST00000429656 993 ntBASIC16.04■□□□□ 0.16
CDKN2DP55273 FAM58CP-201ENST00000435741 640 ntBASIC16.04■□□□□ 0.16
CDKN2DP55273 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2DP55273 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKN2DP55273 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKN2DP55273 AL135744.1-201ENST00000565098 629 ntBASIC16.04■□□□□ 0.16
CDKN2DP55273 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDKN2DP55273 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2DP55273 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2DP55273 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDKN2DP55273 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKN2DP55273 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKN2DP55273 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 AKAP8P1-201ENST00000434743 1349 ntBASIC16.03■□□□□ 0.16
CDKN2DP55273 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKN2DP55273 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CDKN2DP55273 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 MIR574-201ENST00000385209 96 ntBASIC16.03■□□□□ 0.16
CDKN2DP55273 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKN2DP55273 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 TFAMP1-201ENST00000412727 736 ntBASIC16.03■□□□□ 0.16
CDKN2DP55273 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 PGAM5P1-201ENST00000518923 814 ntBASIC16.03■□□□□ 0.16
CDKN2DP55273 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKN2DP55273 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKN2DP55273 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDKN2DP55273 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2DP55273 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDKN2DP55273 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.02■□□□□ 0.16
CDKN2DP55273 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDKN2DP55273 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2DP55273 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 AL022342.1-201ENST00000400363 863 ntBASIC16.02■□□□□ 0.16
CDKN2DP55273 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.02■□□□□ 0.16
CDKN2DP55273 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2DP55273 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.02■□□□□ 0.16
CDKN2DP55273 ADH5P3-201ENST00000433842 1137 ntBASIC16.02■□□□□ 0.16
CDKN2DP55273 POLD2P1-201ENST00000511220 997 ntBASIC16.02■□□□□ 0.16
CDKN2DP55273 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.02■□□□□ 0.16
CDKN2DP55273 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2DP55273 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms