Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
HMGA2P52926 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 AC068418.2-201ENST00000577309 3703 ntBASIC14.82□□□□□ -0.04
HMGA2P52926 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
HMGA2P52926 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 GPX1P2-201ENST00000429271 606 ntBASIC14.82□□□□□ -0.04
HMGA2P52926 HNRNPDP1-201ENST00000439535 754 ntBASIC14.82□□□□□ -0.04
HMGA2P52926 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.82□□□□□ -0.04
HMGA2P52926 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 KRT18P34-201ENST00000488218 1270 ntBASIC14.82□□□□□ -0.04
HMGA2P52926 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGA2P52926 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGA2P52926 AC012640.2-201ENST00000561606 901 ntBASIC14.82□□□□□ -0.04
HMGA2P52926 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGA2P52926 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
HMGA2P52926 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA2P52926 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 AP002414.3-201ENST00000589352 1468 ntBASIC14.82□□□□□ -0.04
HMGA2P52926 LINC02228-204ENST00000642115 2962 ntBASIC14.82□□□□□ -0.04
HMGA2P52926 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA2P52926 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA2P52926 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGA2P52926 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMGA2P52926 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGA2P52926 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA2P52926 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGA2P52926 HCG4P8-203ENST00000443049 980 ntBASIC14.81□□□□□ -0.04
HMGA2P52926 AL513480.1-201ENST00000451731 511 ntBASIC14.81□□□□□ -0.04
HMGA2P52926 AC018712.1-201ENST00000455767 687 ntBASIC14.81□□□□□ -0.04
HMGA2P52926 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGA2P52926 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA2P52926 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
HMGA2P52926 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.81□□□□□ -0.04
HMGA2P52926 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGA2P52926 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA2P52926 AC002347.1-201ENST00000569543 541 ntBASIC14.81□□□□□ -0.04
HMGA2P52926 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA2P52926 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGA2P52926 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 WASH6P-202ENST00000359512 1437 ntBASIC14.81□□□□□ -0.04
HMGA2P52926 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA2P52926 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA2P52926 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA2P52926 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms