Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.01■□□□□ 0.15
GTF2A1P52655 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.01■□□□□ 0.15
GTF2A1P52655 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GTF2A1P52655 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GTF2A1P52655 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
GTF2A1P52655 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.01■□□□□ 0.15
GTF2A1P52655 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GTF2A1P52655 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.01■□□□□ 0.15
GTF2A1P52655 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
GTF2A1P52655 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC16■□□□□ 0.15
GTF2A1P52655 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
GTF2A1P52655 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16■□□□□ 0.15
GTF2A1P52655 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16■□□□□ 0.15
GTF2A1P52655 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
GTF2A1P52655 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 AC090192.1-201ENST00000517740 490 ntBASIC16■□□□□ 0.15
GTF2A1P52655 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16■□□□□ 0.15
GTF2A1P52655 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 MIR4674-201ENST00000582457 87 ntBASIC16■□□□□ 0.15
GTF2A1P52655 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 AC112504.1-201ENST00000623415 1841 ntBASIC16■□□□□ 0.15
GTF2A1P52655 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16■□□□□ 0.15
GTF2A1P52655 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16■□□□□ 0.15
GTF2A1P52655 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
GTF2A1P52655 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16■□□□□ 0.15
GTF2A1P52655 AC096733.2-201ENST00000609937 1394 ntBASIC16■□□□□ 0.15
GTF2A1P52655 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GTF2A1P52655 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 AC016027.1-202ENST00000607927 1699 ntBASIC15.99■□□□□ 0.15
GTF2A1P52655 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
GTF2A1P52655 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.99■□□□□ 0.15
GTF2A1P52655 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.99■□□□□ 0.15
GTF2A1P52655 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
GTF2A1P52655 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
GTF2A1P52655 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.99■□□□□ 0.15
GTF2A1P52655 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.99■□□□□ 0.15
GTF2A1P52655 SLC25A1P3-201ENST00000395415 828 ntBASIC15.99■□□□□ 0.15
GTF2A1P52655 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.99■□□□□ 0.15
GTF2A1P52655 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.99■□□□□ 0.15
GTF2A1P52655 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.99■□□□□ 0.15
GTF2A1P52655 C1QBPP2-201ENST00000528754 825 ntBASIC15.99■□□□□ 0.15
GTF2A1P52655 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.99■□□□□ 0.15
GTF2A1P52655 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.99■□□□□ 0.15
GTF2A1P52655 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
GTF2A1P52655 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
GTF2A1P52655 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
GTF2A1P52655 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.99■□□□□ 0.15
GTF2A1P52655 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
GTF2A1P52655 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GTF2A1P52655 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
GTF2A1P52655 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
GTF2A1P52655 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms