Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.25■□□□□ 0.35
CLCNKBP51801 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.25■□□□□ 0.35
CLCNKBP51801 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CLCNKBP51801 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CLCNKBP51801 AC004987.2-201ENST00000395959 1148 ntBASIC17.25■□□□□ 0.35
CLCNKBP51801 FO393414.2-201ENST00000405153 598 ntBASIC17.25■□□□□ 0.35
CLCNKBP51801 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCNKBP51801 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCNKBP51801 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.25■□□□□ 0.35
CLCNKBP51801 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCNKBP51801 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLCNKBP51801 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.25■□□□□ 0.35
CLCNKBP51801 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCNKBP51801 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCNKBP51801 SRD5A3P1-201ENST00000603021 949 ntBASIC17.25■□□□□ 0.35
CLCNKBP51801 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCNKBP51801 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CLCNKBP51801 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.25■□□□□ 0.35
CLCNKBP51801 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCNKBP51801 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CLCNKBP51801 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLCNKBP51801 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCNKBP51801 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLCNKBP51801 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CLCNKBP51801 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CLCNKBP51801 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCNKBP51801 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCNKBP51801 AL353779.1-201ENST00000434793 351 ntBASIC17.24■□□□□ 0.35
CLCNKBP51801 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCNKBP51801 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCNKBP51801 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.24■□□□□ 0.35
CLCNKBP51801 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CLCNKBP51801 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCNKBP51801 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 AC243562.2-201ENST00000561247 970 ntBASIC17.24■□□□□ 0.35
CLCNKBP51801 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCNKBP51801 AC025048.3-201ENST00000590609 569 ntBASIC17.24■□□□□ 0.35
CLCNKBP51801 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.24■□□□□ 0.35
CLCNKBP51801 AC005702.4-201ENST00000618393 416 ntBASIC17.24■□□□□ 0.35
CLCNKBP51801 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CLCNKBP51801 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCNKBP51801 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CLCNKBP51801 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCNKBP51801 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCNKBP51801 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.24■□□□□ 0.35
CLCNKBP51801 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLCNKBP51801 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CLCNKBP51801 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLCNKBP51801 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLCNKBP51801 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKBP51801 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.23■□□□□ 0.35
CLCNKBP51801 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
CLCNKBP51801 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLCNKBP51801 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CLCNKBP51801 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CLCNKBP51801 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.23■□□□□ 0.35
CLCNKBP51801 AL589987.1-201ENST00000453380 819 ntBASIC17.23■□□□□ 0.35
CLCNKBP51801 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 RN7SL692P-201ENST00000464677 288 ntBASIC17.23■□□□□ 0.35
CLCNKBP51801 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 AL596325.1-201ENST00000563991 1082 ntBASIC17.23■□□□□ 0.35
CLCNKBP51801 TP53TG3HP-202ENST00000569755 579 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms