Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN2P51788 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN2P51788 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN2P51788 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCN2P51788 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLCN2P51788 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN2P51788 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN2P51788 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN2P51788 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CLCN2P51788 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN2P51788 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN2P51788 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLCN2P51788 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN2P51788 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN2P51788 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN2P51788 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN2P51788 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 KRT8P49-201ENST00000604166 1432 ntBASIC15.79■□□□□ 0.12
CLCN2P51788 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN2P51788 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLCN2P51788 FAM185BP-201ENST00000443595 716 ntBASIC15.79■□□□□ 0.12
CLCN2P51788 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.79■□□□□ 0.12
CLCN2P51788 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.79■□□□□ 0.12
CLCN2P51788 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN2P51788 MTDHP5-201ENST00000598980 586 ntBASIC15.79■□□□□ 0.12
CLCN2P51788 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN2P51788 AC004877.2-201ENST00000623941 599 ntBASIC15.79■□□□□ 0.12
CLCN2P51788 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLCN2P51788 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN2P51788 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN2P51788 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN2P51788 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCN2P51788 BCAR1-209ENST00000546196 1340 ntBASIC15.78■□□□□ 0.12
CLCN2P51788 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLCN2P51788 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCN2P51788 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCN2P51788 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCN2P51788 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CLCN2P51788 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCN2P51788 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCN2P51788 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN2P51788 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms