Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.88■□□□□ 0.77
TM4SF1P30408 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TM4SF1P30408 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.88■□□□□ 0.77
TM4SF1P30408 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.88■□□□□ 0.77
TM4SF1P30408 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF1P30408 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.88■□□□□ 0.77
TM4SF1P30408 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF1P30408 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.88■□□□□ 0.77
TM4SF1P30408 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.88■□□□□ 0.77
TM4SF1P30408 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.88■□□□□ 0.77
TM4SF1P30408 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF1P30408 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TM4SF1P30408 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM4SF1P30408 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
TM4SF1P30408 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.88■□□□□ 0.77
TM4SF1P30408 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.87■□□□□ 0.77
TM4SF1P30408 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 AL607033.1-201ENST00000623900 1599 ntBASIC19.87■□□□□ 0.77
TM4SF1P30408 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TM4SF1P30408 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TM4SF1P30408 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TM4SF1P30408 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.87■□□□□ 0.77
TM4SF1P30408 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TM4SF1P30408 AC136604.1-201ENST00000418535 575 ntBASIC19.87■□□□□ 0.77
TM4SF1P30408 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.87■□□□□ 0.77
TM4SF1P30408 PHKG1P2-201ENST00000457537 863 ntBASIC19.87■□□□□ 0.77
TM4SF1P30408 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.87■□□□□ 0.77
TM4SF1P30408 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 AC026410.3-201ENST00000514280 936 ntBASIC19.87■□□□□ 0.77
TM4SF1P30408 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.87■□□□□ 0.77
TM4SF1P30408 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TM4SF1P30408 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.87■□□□□ 0.77
TM4SF1P30408 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.87■□□□□ 0.77
TM4SF1P30408 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.87■□□□□ 0.77
TM4SF1P30408 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.87■□□□□ 0.77
TM4SF1P30408 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TM4SF1P30408 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TM4SF1P30408 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TM4SF1P30408 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TM4SF1P30408 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM4SF1P30408 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.87■□□□□ 0.77
TM4SF1P30408 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.86■□□□□ 0.77
TM4SF1P30408 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.86■□□□□ 0.77
TM4SF1P30408 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.86■□□□□ 0.77
TM4SF1P30408 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
TM4SF1P30408 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TM4SF1P30408 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TM4SF1P30408 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 AC006001.1-201ENST00000325130 474 ntBASIC19.86■□□□□ 0.77
TM4SF1P30408 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 CALR4P-201ENST00000431943 946 ntBASIC19.86■□□□□ 0.77
TM4SF1P30408 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.86■□□□□ 0.77
TM4SF1P30408 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.86■□□□□ 0.77
TM4SF1P30408 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.86■□□□□ 0.77
TM4SF1P30408 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.86■□□□□ 0.77
TM4SF1P30408 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.86■□□□□ 0.77
TM4SF1P30408 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.86■□□□□ 0.77
TM4SF1P30408 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.86■□□□□ 0.77
TM4SF1P30408 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.86■□□□□ 0.77
TM4SF1P30408 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF1P30408 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
TM4SF1P30408 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TM4SF1P30408 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF1P30408 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.85■□□□□ 0.77
TM4SF1P30408 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF1P30408 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms