Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTR1EP28566 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
HTR1EP28566 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.62■□□□□ 0.09
HTR1EP28566 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.62■□□□□ 0.09
HTR1EP28566 FAM8A3P-201ENST00000427218 844 ntBASIC15.62■□□□□ 0.09
HTR1EP28566 KRT18P27-201ENST00000427733 1299 ntBASIC15.62■□□□□ 0.09
HTR1EP28566 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.62■□□□□ 0.09
HTR1EP28566 KRT18P2-201ENST00000447938 1258 ntBASIC15.62■□□□□ 0.09
HTR1EP28566 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
HTR1EP28566 AC136632.2-201ENST00000512891 861 ntBASIC15.62■□□□□ 0.09
HTR1EP28566 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.62■□□□□ 0.09
HTR1EP28566 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.62■□□□□ 0.09
HTR1EP28566 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.62■□□□□ 0.09
HTR1EP28566 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.62■□□□□ 0.09
HTR1EP28566 REXO1L3P-201ENST00000622202 1288 ntBASIC15.62■□□□□ 0.09
HTR1EP28566 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.62■□□□□ 0.09
HTR1EP28566 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.62■□□□□ 0.09
HTR1EP28566 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.62■□□□□ 0.09
HTR1EP28566 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTR1EP28566 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.62■□□□□ 0.09
HTR1EP28566 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.62■□□□□ 0.09
HTR1EP28566 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.61■□□□□ 0.09
HTR1EP28566 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 NCF1C-201ENST00000438382 1427 ntBASIC15.61■□□□□ 0.09
HTR1EP28566 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
HTR1EP28566 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
HTR1EP28566 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
HTR1EP28566 CNN2P11-201ENST00000429351 262 ntBASIC15.61■□□□□ 0.09
HTR1EP28566 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
HTR1EP28566 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.61■□□□□ 0.09
HTR1EP28566 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.61■□□□□ 0.09
HTR1EP28566 AC068418.2-201ENST00000577309 3703 ntBASIC15.61■□□□□ 0.09
HTR1EP28566 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.61■□□□□ 0.09
HTR1EP28566 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.61■□□□□ 0.09
HTR1EP28566 PPT1-215ENST00000641471 2368 ntBASIC15.61■□□□□ 0.09
HTR1EP28566 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTR1EP28566 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTR1EP28566 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
HTR1EP28566 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
HTR1EP28566 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HTR1EP28566 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTR1EP28566 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTR1EP28566 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms