Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHMLP26374 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMLP26374 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMLP26374 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMLP26374 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMLP26374 AP001282.1-201ENST00000531301 1499 ntBASIC19.55■□□□□ 0.72
CHMLP26374 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHMLP26374 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMLP26374 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMLP26374 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMLP26374 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMLP26374 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.55■□□□□ 0.72
CHMLP26374 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.55■□□□□ 0.72
CHMLP26374 KRT8P23-201ENST00000560090 1207 ntBASIC19.55■□□□□ 0.72
CHMLP26374 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CHMLP26374 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMLP26374 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHMLP26374 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.55■□□□□ 0.72
CHMLP26374 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMLP26374 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHMLP26374 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMLP26374 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMLP26374 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMLP26374 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHMLP26374 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMLP26374 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMLP26374 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMLP26374 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMLP26374 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMLP26374 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 YBX1P5-201ENST00000509441 847 ntBASIC19.54■□□□□ 0.72
CHMLP26374 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMLP26374 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMLP26374 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMLP26374 AC005829.1-201ENST00000570002 483 ntBASIC19.54■□□□□ 0.72
CHMLP26374 AC024267.1-201ENST00000582320 895 ntBASIC19.54■□□□□ 0.72
CHMLP26374 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMLP26374 AC105339.1-204ENST00000636249 355 ntBASIC19.54■□□□□ 0.72
CHMLP26374 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMLP26374 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMLP26374 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMLP26374 AP003680.1-201ENST00000598970 3660 ntBASIC19.54■□□□□ 0.72
CHMLP26374 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMLP26374 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHMLP26374 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHMLP26374 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 AL691432.1-201ENST00000596308 1422 ntBASIC19.53■□□□□ 0.72
CHMLP26374 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
CHMLP26374 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMLP26374 AL592309.1-201ENST00000443127 649 ntBASIC19.53■□□□□ 0.72
CHMLP26374 CEND1P1-201ENST00000451006 455 ntBASIC19.53■□□□□ 0.72
CHMLP26374 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHMLP26374 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMLP26374 SLC25A39P2-201ENST00000537614 270 ntBASIC19.53■□□□□ 0.72
CHMLP26374 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.53■□□□□ 0.72
CHMLP26374 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms