Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 AC005052.1-201ENST00000625181 2492 ntBASIC13.98□□□□□ -0.17
CD40P25942 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CD40P25942 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.98□□□□□ -0.17
CD40P25942 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.98□□□□□ -0.17
CD40P25942 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD40P25942 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.97□□□□□ -0.17
CD40P25942 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.97□□□□□ -0.17
CD40P25942 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 COX20P2-201ENST00000452636 358 ntBASIC13.97□□□□□ -0.17
CD40P25942 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 SERBP1P5-201ENST00000510079 1181 ntBASIC13.97□□□□□ -0.17
CD40P25942 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.97□□□□□ -0.17
CD40P25942 AC009407.1-201ENST00000568958 598 ntBASIC13.97□□□□□ -0.17
CD40P25942 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.97□□□□□ -0.17
CD40P25942 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.97□□□□□ -0.17
CD40P25942 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.97□□□□□ -0.17
CD40P25942 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD40P25942 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CD40P25942 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CD40P25942 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.96□□□□□ -0.17
CD40P25942 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.96□□□□□ -0.17
CD40P25942 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CD40P25942 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.96□□□□□ -0.17
CD40P25942 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 REXO1L8P-201ENST00000604378 1897 ntBASIC13.96□□□□□ -0.17
CD40P25942 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CD40P25942 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.96□□□□□ -0.17
CD40P25942 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.96□□□□□ -0.17
CD40P25942 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.96□□□□□ -0.17
CD40P25942 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.96□□□□□ -0.17
CD40P25942 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.96□□□□□ -0.17
CD40P25942 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD40P25942 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40P25942 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40P25942 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40P25942 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CD40P25942 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40P25942 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40P25942 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40P25942 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40P25942 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms