Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 FAM185BP-201ENST00000443595 716 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 FAM197Y8-203ENST00000450145 560 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 AC018712.1-201ENST00000455767 687 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 EMBP1-201ENST00000458200 901 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 MIR4515-201ENST00000584082 81 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 AL031055.1-201ENST00000606362 631 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 AC117500.6-201ENST00000624871 588 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 AC005593.1-201ENST00000624894 515 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 AC022532.1-201ENST00000624563 1728 ntBASIC15.13■□□□□ 0.01
TNFRSF1BP20333 PGM5P2-202ENST00000637225 1043 ntBASIC15.13■□□□□ 0.01
TNFRSF1BP20333 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 LINC02228-204ENST00000642115 2962 ntBASIC15.13■□□□□ 0.01
TNFRSF1BP20333 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 TNRC18P2-201ENST00000417666 2714 ntBASIC15.13■□□□□ 0.01
TNFRSF1BP20333 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNFRSF1BP20333 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 U82695.1-201ENST00000635752 1889 ntBASIC15.12■□□□□ 0.01
TNFRSF1BP20333 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 AC008677.1-201ENST00000519230 1561 ntBASIC15.12■□□□□ 0.01
TNFRSF1BP20333 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms