Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CXCL3P19876 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCL3P19876 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CXCL3P19876 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL3P19876 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL3P19876 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCL3P19876 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCL3P19876 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.68□□□□□ -0.22
CXCL3P19876 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.68□□□□□ -0.22
CXCL3P19876 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL3P19876 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL3P19876 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCL3P19876 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CXCL3P19876 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.68□□□□□ -0.22
CXCL3P19876 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
CXCL3P19876 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL3P19876 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL3P19876 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CXCL3P19876 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 AC003669.1-201ENST00000334569 611 ntBASIC13.67□□□□□ -0.22
CXCL3P19876 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCL3P19876 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.67□□□□□ -0.22
CXCL3P19876 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCL3P19876 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL3P19876 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 AC148477.4-201ENST00000613430 1793 ntBASIC13.67□□□□□ -0.22
CXCL3P19876 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CXCL3P19876 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CXCL3P19876 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
CXCL3P19876 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CXCL3P19876 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL3P19876 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL3P19876 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL3P19876 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CXCL3P19876 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL3P19876 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL3P19876 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL3P19876 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL3P19876 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL3P19876 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.66□□□□□ -0.22
CXCL3P19876 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL3P19876 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms