Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD53P19397 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD53P19397 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.84□□□□□ -0.03
CD53P19397 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD53P19397 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD53P19397 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD53P19397 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD53P19397 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD53P19397 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD53P19397 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD53P19397 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.84□□□□□ -0.03
CD53P19397 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.84□□□□□ -0.03
CD53P19397 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD53P19397 AC025580.3-201ENST00000617932 1424 ntBASIC14.83□□□□□ -0.03
CD53P19397 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD53P19397 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD53P19397 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD53P19397 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CD53P19397 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD53P19397 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD53P19397 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CD53P19397 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.83□□□□□ -0.04
CD53P19397 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CD53P19397 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.83□□□□□ -0.04
CD53P19397 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CD53P19397 PTCHD3P3-201ENST00000403073 906 ntBASIC14.83□□□□□ -0.04
CD53P19397 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.83□□□□□ -0.04
CD53P19397 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.83□□□□□ -0.04
CD53P19397 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.83□□□□□ -0.04
CD53P19397 OR7E47P-204ENST00000575924 449 ntBASIC14.83□□□□□ -0.04
CD53P19397 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CD53P19397 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.83□□□□□ -0.04
CD53P19397 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CD53P19397 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.83□□□□□ -0.04
CD53P19397 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.83□□□□□ -0.04
CD53P19397 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.83□□□□□ -0.04
CD53P19397 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CD53P19397 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.83□□□□□ -0.04
CD53P19397 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.83□□□□□ -0.04
CD53P19397 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CD53P19397 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD53P19397 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.82□□□□□ -0.04
CD53P19397 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CD53P19397 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD53P19397 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD53P19397 AC006058.4-201ENST00000624016 1670 ntBASIC14.82□□□□□ -0.04
CD53P19397 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.82□□□□□ -0.04
CD53P19397 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.82□□□□□ -0.04
CD53P19397 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.82□□□□□ -0.04
CD53P19397 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 AC004449.1-201ENST00000564240 433 ntBASIC14.82□□□□□ -0.04
CD53P19397 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 AC004835.2-201ENST00000603762 682 ntBASIC14.82□□□□□ -0.04
CD53P19397 AC091812.2-201ENST00000619081 385 ntBASIC14.82□□□□□ -0.04
CD53P19397 AC007064.4-201ENST00000637740 555 ntBASIC14.82□□□□□ -0.04
CD53P19397 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD53P19397 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD53P19397 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms