Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.37■□□□□ 0.21
THRAP10827 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.37■□□□□ 0.21
THRAP10827 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.37■□□□□ 0.21
THRAP10827 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.37■□□□□ 0.21
THRAP10827 AC004835.2-201ENST00000603762 682 ntBASIC16.37■□□□□ 0.21
THRAP10827 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.37■□□□□ 0.21
THRAP10827 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.37■□□□□ 0.21
THRAP10827 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.37■□□□□ 0.21
THRAP10827 AC105339.1-204ENST00000636249 355 ntBASIC16.37■□□□□ 0.21
THRAP10827 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
THRAP10827 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THRAP10827 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THRAP10827 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
THRAP10827 LINC00895-201ENST00000629028 1637 ntBASIC16.37■□□□□ 0.21
THRAP10827 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
THRAP10827 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
THRAP10827 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
THRAP10827 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.37■□□□□ 0.21
THRAP10827 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.37■□□□□ 0.21
THRAP10827 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
THRAP10827 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
THRAP10827 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.37■□□□□ 0.21
THRAP10827 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.37■□□□□ 0.21
THRAP10827 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.37■□□□□ 0.21
THRAP10827 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.37■□□□□ 0.21
THRAP10827 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.36■□□□□ 0.21
THRAP10827 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.36■□□□□ 0.21
THRAP10827 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.36■□□□□ 0.21
THRAP10827 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
THRAP10827 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.36■□□□□ 0.21
THRAP10827 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
THRAP10827 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
THRAP10827 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.36■□□□□ 0.21
THRAP10827 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
THRAP10827 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.36■□□□□ 0.21
THRAP10827 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 AL645939.2-201ENST00000427340 991 ntBASIC16.36■□□□□ 0.21
THRAP10827 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.36■□□□□ 0.21
THRAP10827 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.36■□□□□ 0.21
THRAP10827 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.36■□□□□ 0.21
THRAP10827 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.36■□□□□ 0.21
THRAP10827 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.36■□□□□ 0.21
THRAP10827 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 AL596087.1-201ENST00000400979 1969 ntBASIC16.36■□□□□ 0.21
THRAP10827 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.36■□□□□ 0.21
THRAP10827 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.36■□□□□ 0.21
THRAP10827 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
THRAP10827 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.36■□□□□ 0.21
THRAP10827 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 AC004461.1-201ENST00000412461 403 ntBASIC16.35■□□□□ 0.21
THRAP10827 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.35■□□□□ 0.21
THRAP10827 TSEN15P1-201ENST00000423257 515 ntBASIC16.35■□□□□ 0.21
THRAP10827 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.35■□□□□ 0.21
THRAP10827 ADH5P3-201ENST00000433842 1137 ntBASIC16.35■□□□□ 0.21
THRAP10827 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.35■□□□□ 0.21
THRAP10827 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
THRAP10827 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.35■□□□□ 0.21
THRAP10827 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.35■□□□□ 0.21
THRAP10827 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.35■□□□□ 0.21
THRAP10827 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.35■□□□□ 0.21
THRAP10827 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms