Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPRFP10586 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPRFP10586 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPRFP10586 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PTPRFP10586 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPRFP10586 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPRFP10586 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 ME2P1-201ENST00000426028 1970 ntBASIC18.3■□□□□ 0.52
PTPRFP10586 RPL13AP20-201ENST00000459725 609 ntBASIC18.3■□□□□ 0.52
PTPRFP10586 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPRFP10586 AC015910.1-201ENST00000579400 975 ntBASIC18.3■□□□□ 0.52
PTPRFP10586 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPRFP10586 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPRFP10586 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPRFP10586 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPRFP10586 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PTPRFP10586 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPRFP10586 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PTPRFP10586 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPRFP10586 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PTPRFP10586 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 FAM86HP-204ENST00000513466 959 ntBASIC18.29■□□□□ 0.52
PTPRFP10586 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 AC010328.2-201ENST00000597698 1111 ntBASIC18.29■□□□□ 0.52
PTPRFP10586 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PTPRFP10586 REXO1L1P-202ENST00000608646 1974 ntBASIC18.29■□□□□ 0.52
PTPRFP10586 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 AC134312.5-201ENST00000568031 1313 ntBASIC18.29■□□□□ 0.52
PTPRFP10586 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 AL607033.1-201ENST00000623900 1599 ntBASIC18.29■□□□□ 0.52
PTPRFP10586 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.29■□□□□ 0.52
PTPRFP10586 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPRFP10586 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPRFP10586 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.29■□□□□ 0.52
PTPRFP10586 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPRFP10586 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPRFP10586 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PTPRFP10586 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.28■□□□□ 0.52
PTPRFP10586 ENPP7P5-201ENST00000541031 1031 ntBASIC18.28■□□□□ 0.52
PTPRFP10586 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.28■□□□□ 0.52
PTPRFP10586 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.28■□□□□ 0.52
PTPRFP10586 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PTPRFP10586 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPRFP10586 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PTPRFP10586 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPRFP10586 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PTPRFP10586 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPRFP10586 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPRFP10586 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms