Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 AC092919.2-201ENST00000623631 1645 ntBASIC16.07■□□□□ 0.16
CAPN1P07384 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.07■□□□□ 0.16
CAPN1P07384 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN1P07384 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN1P07384 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CAPN1P07384 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN1P07384 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CAPN1P07384 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CAPN1P07384 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN1P07384 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN1P07384 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN1P07384 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN1P07384 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.06■□□□□ 0.16
CAPN1P07384 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN1P07384 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN1P07384 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
CAPN1P07384 METTL21AP1-201ENST00000438852 635 ntBASIC16.06■□□□□ 0.16
CAPN1P07384 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN1P07384 POU5F1P6-201ENST00000466990 990 ntBASIC16.06■□□□□ 0.16
CAPN1P07384 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN1P07384 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN1P07384 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CAPN1P07384 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN1P07384 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CAPN1P07384 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.06■□□□□ 0.16
CAPN1P07384 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN1P07384 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CAPN1P07384 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN1P07384 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 REXO1L8P-201ENST00000604378 1897 ntBASIC16.05■□□□□ 0.16
CAPN1P07384 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN1P07384 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN1P07384 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN1P07384 AC024909.3-201ENST00000611513 2257 ntBASIC16.05■□□□□ 0.16
CAPN1P07384 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN1P07384 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CAPN1P07384 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN1P07384 HMGN1P19-201ENST00000436976 333 ntBASIC16.05■□□□□ 0.16
CAPN1P07384 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN1P07384 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.05■□□□□ 0.16
CAPN1P07384 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN1P07384 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN1P07384 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms