Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AL009183.1-201ENST00000603760 355 ntBASIC16.34■□□□□ 0.21
APOA4P06727 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
APOA4P06727 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
APOA4P06727 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.34■□□□□ 0.21
APOA4P06727 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
APOA4P06727 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.34■□□□□ 0.21
APOA4P06727 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.34■□□□□ 0.21
APOA4P06727 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APOA4P06727 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APOA4P06727 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
APOA4P06727 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APOA4P06727 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APOA4P06727 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APOA4P06727 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APOA4P06727 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
APOA4P06727 AC112504.1-201ENST00000623415 1841 ntBASIC16.33■□□□□ 0.21
APOA4P06727 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APOA4P06727 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
APOA4P06727 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
APOA4P06727 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.33■□□□□ 0.2
APOA4P06727 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.33■□□□□ 0.2
APOA4P06727 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 AC023274.1-201ENST00000418278 595 ntBASIC16.33■□□□□ 0.2
APOA4P06727 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.33■□□□□ 0.2
APOA4P06727 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.33■□□□□ 0.2
APOA4P06727 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.33■□□□□ 0.2
APOA4P06727 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.33■□□□□ 0.2
APOA4P06727 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.33■□□□□ 0.2
APOA4P06727 AC092865.6-201ENST00000642101 219 ntBASIC16.33■□□□□ 0.2
APOA4P06727 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 PMS2P7-201ENST00000506558 1336 ntBASIC16.33■□□□□ 0.2
APOA4P06727 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.33■□□□□ 0.2
APOA4P06727 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.33■□□□□ 0.2
APOA4P06727 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.33■□□□□ 0.2
APOA4P06727 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.33■□□□□ 0.2
APOA4P06727 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.33■□□□□ 0.2
APOA4P06727 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.33■□□□□ 0.2
APOA4P06727 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOA4P06727 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.33■□□□□ 0.2
APOA4P06727 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
APOA4P06727 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.33■□□□□ 0.2
APOA4P06727 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.33■□□□□ 0.2
APOA4P06727 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.32■□□□□ 0.2
APOA4P06727 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
APOA4P06727 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.32■□□□□ 0.2
APOA4P06727 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
APOA4P06727 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
APOA4P06727 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.32■□□□□ 0.2
APOA4P06727 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
APOA4P06727 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.32■□□□□ 0.2
APOA4P06727 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.32■□□□□ 0.2
APOA4P06727 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.32■□□□□ 0.2
APOA4P06727 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.32■□□□□ 0.2
APOA4P06727 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.32■□□□□ 0.2
APOA4P06727 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.32■□□□□ 0.2
APOA4P06727 AC069224.1-201ENST00000566372 1715 ntBASIC16.32■□□□□ 0.2
APOA4P06727 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.32■□□□□ 0.2
APOA4P06727 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.32■□□□□ 0.2
APOA4P06727 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 AC092384.3-202ENST00000564646 2873 ntBASIC16.32■□□□□ 0.2
APOA4P06727 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
APOA4P06727 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOA4P06727 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.32■□□□□ 0.2
APOA4P06727 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOA4P06727 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms