Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.97■□□□□ 0.95
COL5A2P05997 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 AC105020.1-201ENST00000435356 2205 ntBASIC20.97■□□□□ 0.95
COL5A2P05997 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.97■□□□□ 0.95
COL5A2P05997 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 MTX1P1-201ENST00000440904 838 ntBASIC20.97■□□□□ 0.95
COL5A2P05997 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.97■□□□□ 0.95
COL5A2P05997 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.97■□□□□ 0.95
COL5A2P05997 AP006547.1-201ENST00000563435 692 ntBASIC20.97■□□□□ 0.95
COL5A2P05997 AL450472.2-201ENST00000603663 1156 ntBASIC20.97■□□□□ 0.95
COL5A2P05997 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.97■□□□□ 0.95
COL5A2P05997 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.97■□□□□ 0.95
COL5A2P05997 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.97■□□□□ 0.95
COL5A2P05997 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL5A2P05997 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.97■□□□□ 0.95
COL5A2P05997 REXO1L1P-202ENST00000608646 1974 ntBASIC20.97■□□□□ 0.95
COL5A2P05997 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.97■□□□□ 0.95
COL5A2P05997 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.96■□□□□ 0.95
COL5A2P05997 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.96■□□□□ 0.95
COL5A2P05997 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.96■□□□□ 0.95
COL5A2P05997 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.96■□□□□ 0.95
COL5A2P05997 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 MIR663B-201ENST00000408361 115 ntBASIC20.96■□□□□ 0.95
COL5A2P05997 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 SCARNA20.5-201ENST00000516991 142 ntBASIC20.96■□□□□ 0.95
COL5A2P05997 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.96■□□□□ 0.95
COL5A2P05997 AC093813.1-201ENST00000605066 256 ntBASIC20.96■□□□□ 0.95
COL5A2P05997 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.96■□□□□ 0.95
COL5A2P05997 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.96■□□□□ 0.95
COL5A2P05997 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.96■□□□□ 0.95
COL5A2P05997 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.96■□□□□ 0.95
COL5A2P05997 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.96■□□□□ 0.95
COL5A2P05997 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL5A2P05997 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COL5A2P05997 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.96■□□□□ 0.95
COL5A2P05997 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.95■□□□□ 0.94
COL5A2P05997 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.95■□□□□ 0.94
COL5A2P05997 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.95■□□□□ 0.94
COL5A2P05997 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL5A2P05997 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.95■□□□□ 0.94
COL5A2P05997 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.95■□□□□ 0.94
COL5A2P05997 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC20.95■□□□□ 0.94
COL5A2P05997 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
COL5A2P05997 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.95■□□□□ 0.94
COL5A2P05997 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.95■□□□□ 0.94
COL5A2P05997 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
COL5A2P05997 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL5A2P05997 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.94■□□□□ 0.94
COL5A2P05997 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL5A2P05997 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
COL5A2P05997 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.94■□□□□ 0.94
COL5A2P05997 AC004898.1-201ENST00000451057 766 ntBASIC20.94■□□□□ 0.94
COL5A2P05997 RPSAP36-202ENST00000494591 1261 ntBASIC20.94■□□□□ 0.94
COL5A2P05997 AP001582.1-201ENST00000525856 295 ntBASIC20.94■□□□□ 0.94
COL5A2P05997 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.94■□□□□ 0.94
COL5A2P05997 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.94■□□□□ 0.94
COL5A2P05997 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.94■□□□□ 0.94
COL5A2P05997 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.94■□□□□ 0.94
COL5A2P05997 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.94■□□□□ 0.94
COL5A2P05997 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL5A2P05997 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.94■□□□□ 0.94
COL5A2P05997 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms