Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 RPS8P6-201ENST00000426177 609 ntBASIC16.46■□□□□ 0.23
HLA-DQB2P05538 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 ALG1L8P-201ENST00000533887 760 ntBASIC16.46■□□□□ 0.23
HLA-DQB2P05538 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 AL691403.2-201ENST00000618460 490 ntBASIC16.46■□□□□ 0.23
HLA-DQB2P05538 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.46■□□□□ 0.22
HLA-DQB2P05538 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DQB2P05538 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DQB2P05538 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DQB2P05538 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 RBPMS2P1-201ENST00000437762 623 ntBASIC16.45■□□□□ 0.22
HLA-DQB2P05538 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 SNHG9-202ENST00000564014 471 ntBASIC16.45■□□□□ 0.22
HLA-DQB2P05538 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB2P05538 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 AC022188.1-201ENST00000620960 1664 ntBASIC16.44■□□□□ 0.22
HLA-DQB2P05538 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 SPDYE14P-201ENST00000442619 822 ntBASIC16.44■□□□□ 0.22
HLA-DQB2P05538 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB2P05538 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms