Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APOC3P02656 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.07□□□□□ -0.32
APOC3P02656 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.07□□□□□ -0.32
APOC3P02656 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.07□□□□□ -0.32
APOC3P02656 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
APOC3P02656 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 MIR3180-4-201ENST00000582223 153 ntBASIC13.07□□□□□ -0.32
APOC3P02656 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC3P02656 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
APOC3P02656 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 BX640514.1-201ENST00000583223 1918 ntBASIC13.07□□□□□ -0.32
APOC3P02656 AL359881.3-201ENST00000602640 1721 ntBASIC13.07□□□□□ -0.32
APOC3P02656 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC3P02656 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
APOC3P02656 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 AC008677.1-201ENST00000519230 1561 ntBASIC13.07□□□□□ -0.32
APOC3P02656 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC3P02656 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC3P02656 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.06□□□□□ -0.32
APOC3P02656 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC3P02656 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
APOC3P02656 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC3P02656 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 KRT18P11-201ENST00000435214 1283 ntBASIC13.06□□□□□ -0.32
APOC3P02656 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC3P02656 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC3P02656 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.06□□□□□ -0.32
APOC3P02656 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
APOC3P02656 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
APOC3P02656 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC3P02656 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
APOC3P02656 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
APOC3P02656 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 C18orf15-201ENST00000623680 2534 ntBASIC13.05□□□□□ -0.32
APOC3P02656 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC3P02656 NBPF21P-201ENST00000425093 1451 ntBASIC13.05□□□□□ -0.32
APOC3P02656 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
APOC3P02656 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms