Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6AP02538 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6AP02538 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6AP02538 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
KRT6AP02538 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6AP02538 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6AP02538 SLC25A6P4-201ENST00000586535 553 ntBASIC15.81■□□□□ 0.12
KRT6AP02538 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
KRT6AP02538 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6AP02538 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6AP02538 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
KRT6AP02538 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6AP02538 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6AP02538 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6AP02538 AC132872.4-202ENST00000622924 2756 ntBASIC15.81■□□□□ 0.12
KRT6AP02538 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6AP02538 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
KRT6AP02538 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT6AP02538 AC092919.2-201ENST00000623631 1645 ntBASIC15.8■□□□□ 0.12
KRT6AP02538 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT6AP02538 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
KRT6AP02538 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT6AP02538 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6AP02538 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT6AP02538 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6AP02538 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT6AP02538 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT6AP02538 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT6AP02538 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.8■□□□□ 0.12
KRT6AP02538 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT6AP02538 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6AP02538 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6AP02538 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KRT6AP02538 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
KRT6AP02538 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.8■□□□□ 0.12
KRT6AP02538 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6AP02538 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
KRT6AP02538 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KRT6AP02538 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6AP02538 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6AP02538 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT6AP02538 AC069224.1-201ENST00000566372 1715 ntBASIC15.8■□□□□ 0.12
KRT6AP02538 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
KRT6AP02538 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT6AP02538 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT6AP02538 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT6AP02538 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 TSPY26P-202ENST00000565928 3884 ntBASIC15.79■□□□□ 0.12
KRT6AP02538 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT6AP02538 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
KRT6AP02538 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
KRT6AP02538 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT6AP02538 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
KRT6AP02538 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.79■□□□□ 0.12
KRT6AP02538 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
KRT6AP02538 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT6AP02538 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT6AP02538 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
KRT6AP02538 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT6AP02538 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT6AP02538 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT6AP02538 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT6AP02538 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms