Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AP001889.1-201ENST00000525414 633 ntBASIC19.52■□□□□ 0.71
COL4A1P02462 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.52■□□□□ 0.71
COL4A1P02462 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A1P02462 BTNL10-201ENST00000595971 695 ntBASIC19.52■□□□□ 0.71
COL4A1P02462 AL450472.2-201ENST00000603663 1156 ntBASIC19.52■□□□□ 0.71
COL4A1P02462 AC107373.2-201ENST00000607735 490 ntBASIC19.52■□□□□ 0.71
COL4A1P02462 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.52■□□□□ 0.71
COL4A1P02462 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A1P02462 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
COL4A1P02462 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A1P02462 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.52■□□□□ 0.71
COL4A1P02462 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL4A1P02462 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL4A1P02462 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.51■□□□□ 0.71
COL4A1P02462 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.51■□□□□ 0.71
COL4A1P02462 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL4A1P02462 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.51■□□□□ 0.71
COL4A1P02462 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
COL4A1P02462 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL4A1P02462 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.51■□□□□ 0.71
COL4A1P02462 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.51■□□□□ 0.71
COL4A1P02462 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL4A1P02462 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL4A1P02462 AC092364.2-201ENST00000596710 2692 ntBASIC19.5■□□□□ 0.71
COL4A1P02462 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.5■□□□□ 0.71
COL4A1P02462 HAUS4P1-201ENST00000406739 1145 ntBASIC19.5■□□□□ 0.71
COL4A1P02462 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL4A1P02462 BCRP2-202ENST00000447763 634 ntBASIC19.5■□□□□ 0.71
COL4A1P02462 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.5■□□□□ 0.71
COL4A1P02462 BCRP6-201ENST00000510112 632 ntBASIC19.5■□□□□ 0.71
COL4A1P02462 BCRP7-201ENST00000511549 544 ntBASIC19.5■□□□□ 0.71
COL4A1P02462 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.5■□□□□ 0.71
COL4A1P02462 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 AL583810.1-201ENST00000553344 1045 ntBASIC19.5■□□□□ 0.71
COL4A1P02462 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.5■□□□□ 0.71
COL4A1P02462 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.5■□□□□ 0.71
COL4A1P02462 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
COL4A1P02462 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.5■□□□□ 0.71
COL4A1P02462 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL4A1P02462 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL4A1P02462 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A1P02462 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
COL4A1P02462 AC005229.1-201ENST00000392885 409 ntBASIC19.49■□□□□ 0.71
COL4A1P02462 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 ACTG1P3-201ENST00000431775 1114 ntBASIC19.49■□□□□ 0.71
COL4A1P02462 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 CSF2RBP1-201ENST00000447905 391 ntBASIC19.49■□□□□ 0.71
COL4A1P02462 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.49■□□□□ 0.71
COL4A1P02462 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A1P02462 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL4A1P02462 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL4A1P02462 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
COL4A1P02462 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A1P02462 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.49■□□□□ 0.71
COL4A1P02462 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A1P02462 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.49■□□□□ 0.71
COL4A1P02462 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms