Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
MT-CO1P00395 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-CO1P00395 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-CO1P00395 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.69■□□□□ 0.26
MT-CO1P00395 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.69■□□□□ 0.26
MT-CO1P00395 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.69■□□□□ 0.26
MT-CO1P00395 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-CO1P00395 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.69■□□□□ 0.26
MT-CO1P00395 TUBB3P1-201ENST00000405796 1332 ntBASIC16.69■□□□□ 0.26
MT-CO1P00395 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-CO1P00395 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-CO1P00395 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-CO1P00395 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 AC132872.4-202ENST00000622924 2756 ntBASIC16.68■□□□□ 0.26
MT-CO1P00395 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 AC005622.1-201ENST00000636801 1703 ntBASIC16.68■□□□□ 0.26
MT-CO1P00395 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 FAM86GP-201ENST00000448322 971 ntBASIC16.68■□□□□ 0.26
MT-CO1P00395 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 AC051619.7-201ENST00000568314 623 ntBASIC16.68■□□□□ 0.26
MT-CO1P00395 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 MIR6080-201ENST00000617359 66 ntBASIC16.68■□□□□ 0.26
MT-CO1P00395 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.68■□□□□ 0.26
MT-CO1P00395 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-CO1P00395 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.68■□□□□ 0.26
MT-CO1P00395 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
MT-CO1P00395 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-CO1P00395 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.67■□□□□ 0.26
MT-CO1P00395 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 HYMAI-201ENST00000635591 3347 ntBASIC16.67■□□□□ 0.26
MT-CO1P00395 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
MT-CO1P00395 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MT-CO1P00395 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 AL589702.1-201ENST00000641229 1509 ntBASIC16.67■□□□□ 0.26
MT-CO1P00395 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.67■□□□□ 0.26
MT-CO1P00395 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MT-CO1P00395 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 CNN2P2-201ENST00000443536 909 ntBASIC16.67■□□□□ 0.26
MT-CO1P00395 CNN2P3-201ENST00000450201 906 ntBASIC16.67■□□□□ 0.26
MT-CO1P00395 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.67■□□□□ 0.26
MT-CO1P00395 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.67■□□□□ 0.26
MT-CO1P00395 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.67■□□□□ 0.26
MT-CO1P00395 AL136317.3-201ENST00000618497 906 ntBASIC16.67■□□□□ 0.26
MT-CO1P00395 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-CO1P00395 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-CO1P00395 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.67■□□□□ 0.26
MT-CO1P00395 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MT-CO1P00395 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MT-CO1P00395 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.67■□□□□ 0.26
MT-CO1P00395 LINC01144-201ENST00000626198 1710 ntBASIC16.67■□□□□ 0.26
MT-CO1P00395 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-CO1P00395 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-CO1P00395 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms