Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH8O95206 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDH8O95206 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PCDH8O95206 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDH8O95206 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDH8O95206 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.21■□□□□ 0.19
PCDH8O95206 AL080243.2-201ENST00000418783 582 ntBASIC16.21■□□□□ 0.19
PCDH8O95206 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH8O95206 AL139010.1-201ENST00000454878 894 ntBASIC16.21■□□□□ 0.19
PCDH8O95206 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 POU5F1P6-201ENST00000466990 990 ntBASIC16.21■□□□□ 0.19
PCDH8O95206 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH8O95206 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH8O95206 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH8O95206 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDH8O95206 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH8O95206 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PCDH8O95206 AC004233.3-201ENST00000607794 1269 ntBASIC16.21■□□□□ 0.19
PCDH8O95206 AC099398.1-201ENST00000567919 2776 ntBASIC16.21■□□□□ 0.19
PCDH8O95206 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PCDH8O95206 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDH8O95206 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDH8O95206 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.18
PCDH8O95206 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH8O95206 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH8O95206 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PCDH8O95206 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.21■□□□□ 0.18
PCDH8O95206 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH8O95206 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
PCDH8O95206 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PCDH8O95206 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH8O95206 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PCDH8O95206 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH8O95206 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
PCDH8O95206 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH8O95206 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDH8O95206 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDH8O95206 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 RN7SL618P-201ENST00000477850 296 ntBASIC16.2■□□□□ 0.18
PCDH8O95206 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDH8O95206 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH8O95206 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDH8O95206 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PCDH8O95206 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PCDH8O95206 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
PCDH8O95206 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH8O95206 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH8O95206 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH8O95206 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH8O95206 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH8O95206 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH8O95206 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDH8O95206 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH8O95206 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PCDH8O95206 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDH8O95206 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH8O95206 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH8O95206 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH8O95206 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms