Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AC011477.6-201ENST00000604980 1927 ntBASIC14.98□□□□□ -0.01
NKX2-2O95096 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NKX2-2O95096 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.97□□□□□ -0.01
NKX2-2O95096 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX2-2O95096 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX2-2O95096 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 RARRES2P9-201ENST00000565168 469 ntBASIC14.97□□□□□ -0.01
NKX2-2O95096 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.97□□□□□ -0.01
NKX2-2O95096 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX2-2O95096 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-2O95096 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NKX2-2O95096 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-2O95096 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NKX2-2O95096 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-2O95096 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NKX2-2O95096 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NKX2-2O95096 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 AP005117.1-202ENST00000581724 1908 ntBASIC14.96□□□□□ -0.01
NKX2-2O95096 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-2O95096 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NKX2-2O95096 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 KRT18P32-201ENST00000424695 1287 ntBASIC14.96□□□□□ -0.01
NKX2-2O95096 FAM58DP-201ENST00000428076 619 ntBASIC14.96□□□□□ -0.01
NKX2-2O95096 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-2O95096 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-2O95096 AC243562.2-201ENST00000561247 970 ntBASIC14.96□□□□□ -0.01
NKX2-2O95096 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX2-2O95096 AL691432.1-201ENST00000596308 1422 ntBASIC14.96□□□□□ -0.01
NKX2-2O95096 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-2O95096 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-2O95096 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.96□□□□□ -0.02
NKX2-2O95096 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-2O95096 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.96□□□□□ -0.02
NKX2-2O95096 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-2O95096 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-2O95096 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-2O95096 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX2-2O95096 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-2O95096 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-2O95096 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-2O95096 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms