Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CLSTN1O94985 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CLSTN1O94985 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.08■□□□□ 0.48
CLSTN1O94985 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.08■□□□□ 0.48
CLSTN1O94985 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.08■□□□□ 0.48
CLSTN1O94985 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC18.08■□□□□ 0.48
CLSTN1O94985 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.07■□□□□ 0.48
CLSTN1O94985 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 KCP-203ENST00000610776 5108 ntTSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.07■□□□□ 0.48
CLSTN1O94985 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.07■□□□□ 0.48
CLSTN1O94985 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
CLSTN1O94985 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.07■□□□□ 0.48
CLSTN1O94985 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.07■□□□□ 0.48
CLSTN1O94985 KRT19P2-202ENST00000557173 1012 ntBASIC18.07■□□□□ 0.48
CLSTN1O94985 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.07■□□□□ 0.48
CLSTN1O94985 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLSTN1O94985 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.07■□□□□ 0.48
CLSTN1O94985 AC007950.2-201ENST00000615045 2347 ntBASIC18.07■□□□□ 0.48
CLSTN1O94985 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.07■□□□□ 0.48
CLSTN1O94985 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
CLSTN1O94985 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLSTN1O94985 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLSTN1O94985 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.06■□□□□ 0.48
CLSTN1O94985 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLSTN1O94985 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 AL671710.1-201ENST00000610245 2349 ntBASIC18.06■□□□□ 0.48
CLSTN1O94985 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 AC103702.1-201ENST00000548801 2630 ntBASIC18.06■□□□□ 0.48
CLSTN1O94985 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CLSTN1O94985 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.06■□□□□ 0.48
CLSTN1O94985 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.06■□□□□ 0.48
CLSTN1O94985 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.06■□□□□ 0.48
CLSTN1O94985 PID1-202ENST00000392054 2745 ntTSL 2 BASIC18.06■□□□□ 0.48
CLSTN1O94985 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.06■□□□□ 0.48
CLSTN1O94985 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CLSTN1O94985 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.06■□□□□ 0.48
CLSTN1O94985 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
CLSTN1O94985 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLSTN1O94985 AC040169.1-201ENST00000565382 521 ntBASIC18.06■□□□□ 0.48
CLSTN1O94985 AL031432.2-201ENST00000566714 459 ntBASIC18.06■□□□□ 0.48
CLSTN1O94985 AC002347.1-201ENST00000569543 541 ntBASIC18.06■□□□□ 0.48
CLSTN1O94985 AL928711.1-201ENST00000570165 459 ntBASIC18.06■□□□□ 0.48
CLSTN1O94985 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.06■□□□□ 0.48
CLSTN1O94985 MIR4515-201ENST00000584082 81 ntBASIC18.06■□□□□ 0.48
CLSTN1O94985 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CLSTN1O94985 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.06■□□□□ 0.48
CLSTN1O94985 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLSTN1O94985 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLSTN1O94985 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLSTN1O94985 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLSTN1O94985 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms