Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
GPC4O75487 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.37■□□□□ 0.21
GPC4O75487 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.37■□□□□ 0.21
GPC4O75487 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.37■□□□□ 0.21
GPC4O75487 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.37■□□□□ 0.21
GPC4O75487 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 AL365203.3-201ENST00000609742 2057 ntBASIC16.37■□□□□ 0.21
GPC4O75487 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.37■□□□□ 0.21
GPC4O75487 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
GPC4O75487 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.37■□□□□ 0.21
GPC4O75487 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 AC105917.1-201ENST00000506637 2539 ntBASIC16.37■□□□□ 0.21
GPC4O75487 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GPC4O75487 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.36■□□□□ 0.21
GPC4O75487 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
GPC4O75487 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.36■□□□□ 0.21
GPC4O75487 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.36■□□□□ 0.21
GPC4O75487 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.36■□□□□ 0.21
GPC4O75487 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.36■□□□□ 0.21
GPC4O75487 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
GPC4O75487 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.36■□□□□ 0.21
GPC4O75487 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.36■□□□□ 0.21
GPC4O75487 POLD2P1-201ENST00000511220 997 ntBASIC16.36■□□□□ 0.21
GPC4O75487 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.36■□□□□ 0.21
GPC4O75487 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
GPC4O75487 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.36■□□□□ 0.21
GPC4O75487 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.36■□□□□ 0.21
GPC4O75487 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.36■□□□□ 0.21
GPC4O75487 AL031055.1-201ENST00000606362 631 ntBASIC16.36■□□□□ 0.21
GPC4O75487 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.36■□□□□ 0.21
GPC4O75487 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.36■□□□□ 0.21
GPC4O75487 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GPC4O75487 GGT4P-201ENST00000623672 1708 ntBASIC16.36■□□□□ 0.21
GPC4O75487 AL031731.1-201ENST00000642131 2094 ntBASIC16.36■□□□□ 0.21
GPC4O75487 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
GPC4O75487 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GPC4O75487 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
GPC4O75487 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.35■□□□□ 0.21
GPC4O75487 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.35■□□□□ 0.21
GPC4O75487 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
GPC4O75487 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
GPC4O75487 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 AC005052.1-201ENST00000625181 2492 ntBASIC16.35■□□□□ 0.21
GPC4O75487 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
GPC4O75487 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.35■□□□□ 0.21
GPC4O75487 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
GPC4O75487 MIR940-201ENST00000401276 94 ntBASIC16.35■□□□□ 0.21
GPC4O75487 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.35■□□□□ 0.21
GPC4O75487 PMS2P4-201ENST00000412466 1052 ntBASIC16.35■□□□□ 0.21
GPC4O75487 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 AC140658.5-201ENST00000438532 169 ntBASIC16.35■□□□□ 0.21
GPC4O75487 AC074386.1-202ENST00000463561 864 ntBASIC16.35■□□□□ 0.21
GPC4O75487 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.35■□□□□ 0.21
GPC4O75487 AC109635.5-201ENST00000533593 962 ntBASIC16.35■□□□□ 0.21
GPC4O75487 AC040169.1-201ENST00000565382 521 ntBASIC16.35■□□□□ 0.21
GPC4O75487 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
GPC4O75487 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.35■□□□□ 0.21
GPC4O75487 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms