Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
OPHN1O60890 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.04■□□□□ 0.32
OPHN1O60890 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.04■□□□□ 0.32
OPHN1O60890 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
OPHN1O60890 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
OPHN1O60890 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.04■□□□□ 0.32
OPHN1O60890 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.04■□□□□ 0.32
OPHN1O60890 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.04■□□□□ 0.32
OPHN1O60890 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.04■□□□□ 0.32
OPHN1O60890 AC138761.1-201ENST00000584393 385 ntBASIC17.04■□□□□ 0.32
OPHN1O60890 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.04■□□□□ 0.32
OPHN1O60890 LINC00628-201ENST00000628516 1289 ntBASIC17.04■□□□□ 0.32
OPHN1O60890 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
OPHN1O60890 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 AC026691.1-201ENST00000602502 2017 ntBASIC17.04■□□□□ 0.32
OPHN1O60890 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
OPHN1O60890 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
OPHN1O60890 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.04■□□□□ 0.32
OPHN1O60890 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
OPHN1O60890 AC005052.1-201ENST00000625181 2492 ntBASIC17.04■□□□□ 0.32
OPHN1O60890 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.04■□□□□ 0.32
OPHN1O60890 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.03■□□□□ 0.32
OPHN1O60890 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
OPHN1O60890 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
OPHN1O60890 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 GPAA1P2-202ENST00000606848 1787 ntBASIC17.03■□□□□ 0.32
OPHN1O60890 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.03■□□□□ 0.32
OPHN1O60890 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
OPHN1O60890 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.03■□□□□ 0.32
OPHN1O60890 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.03■□□□□ 0.32
OPHN1O60890 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
OPHN1O60890 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.03■□□□□ 0.32
OPHN1O60890 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.03■□□□□ 0.32
OPHN1O60890 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.03■□□□□ 0.32
OPHN1O60890 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
OPHN1O60890 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
OPHN1O60890 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
OPHN1O60890 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
OPHN1O60890 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.03■□□□□ 0.32
OPHN1O60890 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.03■□□□□ 0.32
OPHN1O60890 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.03■□□□□ 0.32
OPHN1O60890 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.03■□□□□ 0.32
OPHN1O60890 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.03■□□□□ 0.32
OPHN1O60890 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
OPHN1O60890 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
OPHN1O60890 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
OPHN1O60890 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
OPHN1O60890 AL513523.2-202ENST00000427283 2040 ntBASIC17.03■□□□□ 0.32
OPHN1O60890 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.02■□□□□ 0.32
OPHN1O60890 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
OPHN1O60890 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
OPHN1O60890 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
OPHN1O60890 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.02■□□□□ 0.32
OPHN1O60890 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
OPHN1O60890 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
OPHN1O60890 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.02■□□□□ 0.32
OPHN1O60890 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
OPHN1O60890 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
OPHN1O60890 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
OPHN1O60890 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms