Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA12O60330 AL391825.1-201ENST00000457671 1364 ntBASIC16.12■□□□□ 0.17
PCDHGA12O60330 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.12■□□□□ 0.17
PCDHGA12O60330 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 LINC02012-201ENST00000608206 1725 ntBASIC16.11■□□□□ 0.17
PCDHGA12O60330 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 HLA-V-201ENST00000429037 534 ntBASIC16.11■□□□□ 0.17
PCDHGA12O60330 U91328.1-201ENST00000437528 223 ntBASIC16.11■□□□□ 0.17
PCDHGA12O60330 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 AC105021.1-202ENST00000570572 669 ntBASIC16.11■□□□□ 0.17
PCDHGA12O60330 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.11■□□□□ 0.17
PCDHGA12O60330 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.11■□□□□ 0.17
PCDHGA12O60330 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.11■□□□□ 0.17
PCDHGA12O60330 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.11■□□□□ 0.17
PCDHGA12O60330 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA12O60330 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA12O60330 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 AC138969.3-201ENST00000546612 1459 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 AC138932.2-201ENST00000548268 1459 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 AC126755.4-201ENST00000549796 1459 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 DFFBP1-201ENST00000433250 979 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 GPR53P-205ENST00000457298 1084 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA12O60330 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA12O60330 AL133215.2-201ENST00000609242 977 ntBASIC16.1■□□□□ 0.17
PCDHGA12O60330 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms