Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 IGHV3-22-201ENST00000520721 359 ntBASIC16.22■□□□□ 0.19
PHGDHO43175 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.22■□□□□ 0.19
PHGDHO43175 AP001005.1-201ENST00000571755 1248 ntBASIC16.22■□□□□ 0.19
PHGDHO43175 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.22■□□□□ 0.19
PHGDHO43175 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.22■□□□□ 0.19
PHGDHO43175 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHGDHO43175 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PHGDHO43175 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PHGDHO43175 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PHGDHO43175 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PHGDHO43175 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 AP002414.2-201ENST00000591780 3365 ntBASIC16.21■□□□□ 0.19
PHGDHO43175 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PHGDHO43175 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
PHGDHO43175 AC093909.1-201ENST00000504731 1122 ntBASIC16.21■□□□□ 0.19
PHGDHO43175 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.21■□□□□ 0.19
PHGDHO43175 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.21■□□□□ 0.19
PHGDHO43175 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.21■□□□□ 0.19
PHGDHO43175 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.21■□□□□ 0.19
PHGDHO43175 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PHGDHO43175 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PHGDHO43175 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHGDHO43175 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PHGDHO43175 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PHGDHO43175 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PHGDHO43175 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.2■□□□□ 0.18
PHGDHO43175 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.2■□□□□ 0.18
PHGDHO43175 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.2■□□□□ 0.18
PHGDHO43175 AC096734.2-201ENST00000562054 433 ntBASIC16.2■□□□□ 0.18
PHGDHO43175 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 SLC25A6P4-201ENST00000586535 553 ntBASIC16.2■□□□□ 0.18
PHGDHO43175 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 AL009183.1-201ENST00000603760 355 ntBASIC16.2■□□□□ 0.18
PHGDHO43175 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PHGDHO43175 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.2■□□□□ 0.18
PHGDHO43175 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PHGDHO43175 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PHGDHO43175 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.19■□□□□ 0.18
PHGDHO43175 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PHGDHO43175 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.19■□□□□ 0.18
PHGDHO43175 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms