Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK2O00526 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK2O00526 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK2O00526 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK2O00526 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK2O00526 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK2O00526 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK2O00526 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.07□□□□□ -0.32
UPK2O00526 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.07□□□□□ -0.32
UPK2O00526 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK2O00526 AC092384.3-202ENST00000564646 2873 ntBASIC13.06□□□□□ -0.32
UPK2O00526 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 AC067930.6-201ENST00000623257 4947 ntBASIC13.06□□□□□ -0.32
UPK2O00526 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK2O00526 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK2O00526 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK2O00526 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK2O00526 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 MRPL3P1-201ENST00000400109 1033 ntBASIC13.06□□□□□ -0.32
UPK2O00526 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK2O00526 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
UPK2O00526 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
UPK2O00526 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.06□□□□□ -0.32
UPK2O00526 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.06□□□□□ -0.32
UPK2O00526 RNA5SP419-201ENST00000515908 135 ntBASIC13.06□□□□□ -0.32
UPK2O00526 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.06□□□□□ -0.32
UPK2O00526 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.06□□□□□ -0.32
UPK2O00526 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK2O00526 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
UPK2O00526 AC104640.1-201ENST00000562617 2109 ntBASIC13.06□□□□□ -0.32
UPK2O00526 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK2O00526 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 HYMAI-201ENST00000635591 3347 ntBASIC13.05□□□□□ -0.32
UPK2O00526 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.05□□□□□ -0.32
UPK2O00526 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK2O00526 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 AC140658.5-201ENST00000438532 169 ntBASIC13.05□□□□□ -0.32
UPK2O00526 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 AC245100.5-201ENST00000452108 331 ntBASIC13.05□□□□□ -0.32
UPK2O00526 AC079776.4-201ENST00000511039 504 ntBASIC13.05□□□□□ -0.32
UPK2O00526 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.05□□□□□ -0.32
UPK2O00526 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms