Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC188H7C350 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC188H7C350 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC188H7C350 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CCDC188H7C350 AC008667.4-201ENST00000607370 168 ntBASIC16.93■□□□□ 0.3
CCDC188H7C350 AC107918.4-202ENST00000641623 219 ntBASIC16.93■□□□□ 0.3
CCDC188H7C350 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC188H7C350 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC188H7C350 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC188H7C350 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC188H7C350 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC188H7C350 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC188H7C350 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC188H7C350 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 AC067930.6-201ENST00000623257 4947 ntBASIC16.92■□□□□ 0.3
CCDC188H7C350 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CCDC188H7C350 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC188H7C350 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC188H7C350 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC188H7C350 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 RNU1-129P-201ENST00000384064 167 ntBASIC16.92■□□□□ 0.3
CCDC188H7C350 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC188H7C350 KRT18P27-201ENST00000427733 1299 ntBASIC16.92■□□□□ 0.3
CCDC188H7C350 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC188H7C350 U1.21-201ENST00000580816 167 ntBASIC16.92■□□□□ 0.3
CCDC188H7C350 MIR4515-201ENST00000584082 81 ntBASIC16.92■□□□□ 0.3
CCDC188H7C350 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC188H7C350 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC188H7C350 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC188H7C350 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC188H7C350 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CCDC188H7C350 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC188H7C350 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC188H7C350 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC188H7C350 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC188H7C350 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 AC073621.1-201ENST00000392730 636 ntBASIC16.91■□□□□ 0.3
CCDC188H7C350 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC188H7C350 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 AC021087.4-201ENST00000563761 564 ntBASIC16.91■□□□□ 0.3
CCDC188H7C350 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 AL365330.1-201ENST00000607459 531 ntBASIC16.91■□□□□ 0.3
CCDC188H7C350 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC188H7C350 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC188H7C350 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC188H7C350 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC188H7C350 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC188H7C350 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC188H7C350 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC188H7C350 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms