Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 AL160237.2-201ENST00000556165 472 ntBASIC14.19□□□□□ -0.14
SHISA3A0PJX4 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 AC092329.2-201ENST00000598402 547 ntBASIC14.19□□□□□ -0.14
SHISA3A0PJX4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.19□□□□□ -0.14
SHISA3A0PJX4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 AC232323.1-201ENST00000540724 2099 ntBASIC14.19□□□□□ -0.14
SHISA3A0PJX4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.19□□□□□ -0.14
SHISA3A0PJX4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 AC013726.1-201ENST00000563747 2285 ntBASIC14.18□□□□□ -0.14
SHISA3A0PJX4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 HAUS4P1-201ENST00000406739 1145 ntBASIC14.18□□□□□ -0.14
SHISA3A0PJX4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 AC004706.3-202ENST00000621574 984 ntBASIC14.18□□□□□ -0.14
SHISA3A0PJX4 AP001350.2-201ENST00000625104 1094 ntBASIC14.18□□□□□ -0.14
SHISA3A0PJX4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHISA3A0PJX4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 AC011477.6-201ENST00000604980 1927 ntBASIC14.17□□□□□ -0.14
SHISA3A0PJX4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms