Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC091167.2-201ENST00000579581 588 ntBASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 SNX33P1-201ENST00000592116 1762 ntBASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 PRAL-201ENST00000624952 3286 ntBASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 RPS15P9-201ENST00000494093 319 ntBASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC073648.2-201ENST00000510116 352 ntBASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 MIR4492-201ENST00000581627 80 ntBASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 GGT3P-204ENST00000453783 1664 ntBASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF103-CHMP3A0A140T963 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC131009.4-201ENST00000624048 1740 ntBASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 RPS2P1-201ENST00000434010 821 ntBASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 OR7E14P-202ENST00000530490 1290 ntBASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF103-CHMP3A0A140T963 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms