Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 C2orf69P2-201ENST00000562032 1123 ntBASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 HLA-A-202ENST00000376806 1854 ntBASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.39■□□□□ 0.85
LOC102724428A0A0B4J2F2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC105020.1-201ENST00000435356 2205 ntBASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 DUX4L45-201ENST00000566406 1057 ntBASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 RN7SL560P-201ENST00000577943 264 ntBASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 RHOXF1P1-202ENST00000635473 501 ntBASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
LOC102724428A0A0B4J2F2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 GNRHR2-203ENST00000581100 1187 ntBASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 AC008687.7-202ENST00000637404 953 ntBASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LOC102724428A0A0B4J2F2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.36■□□□□ 0.85
LOC102724428A0A0B4J2F2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms