Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC136621.1-201ENST00000624017 2304 ntBASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 PRAL-201ENST00000624952 3286 ntBASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 MRPL20P1-201ENST00000400819 433 ntBASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 AL160237.2-201ENST00000556165 472 ntBASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 MIR4515-201ENST00000584082 81 ntBASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 AL356488.2-201ENST00000602755 427 ntBASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 U82695.1-201ENST00000635752 1889 ntBASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-7A0A0A0MS04 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 RNPS1P1-201ENST00000507437 918 ntBASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 OR7E47P-204ENST00000575924 449 ntBASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC021097.1-201ENST00000607902 574 ntBASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms