Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 REXO1L2P-201ENST00000425429 2069 ntBASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 AGAP7P-201ENST00000582299 2062 ntBASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 AGAP14-201ENST00000624701 2060 ntBASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 AC013467.2-201ENST00000605472 835 ntBASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 AC083880.1-201ENST00000608266 535 ntBASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAPPC1Q9Y5R8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 LINC01230-201ENST00000625222 3017 ntBASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 FGD5P1-202ENST00000614866 2498 ntBASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC29A4P1-201ENST00000398760 971 ntBASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 KRT17P3-201ENST00000420566 1262 ntBASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 SEC1P-202ENST00000473944 940 ntBASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 AP003041.3-201ENST00000527151 707 ntBASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 AC111152.3-201ENST00000569699 673 ntBASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms