Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 AL592424.1-201ENST00000563624 1536 ntBASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA11Q9Y5H2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PCDHGA11Q9Y5H2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA11Q9Y5H2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA11Q9Y5H2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDHGA11Q9Y5H2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.83■□□□□ 0.13
PCDHGA11Q9Y5H2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA11Q9Y5H2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.83■□□□□ 0.13
PCDHGA11Q9Y5H2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 AC026396.1-201ENST00000419388 421 ntBASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 AC027601.4-201ENST00000611259 610 ntBASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 AC120114.3-201ENST00000611923 658 ntBASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 FAM197Y3-203ENST00000618346 717 ntBASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA11Q9Y5H2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AC074386.1-202ENST00000463561 864 ntBASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 PDPK2P-202ENST00000562415 1191 ntBASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AL078644.1-201ENST00000609881 752 ntBASIC15.82■□□□□ 0.12
PCDHGA11Q9Y5H2 AL161645.1-201ENST00000622716 1255 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms