Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 KRT8P37-201ENST00000451609 1420 ntBASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 CYP4F24P-201ENST00000586049 1580 ntBASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 AC012317.2-201ENST00000623305 2251 ntBASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 KRT8P19-201ENST00000551916 1455 ntBASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 LDHBP1-201ENST00000455730 1119 ntBASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 AP001063.1-201ENST00000568332 529 ntBASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.49■□□□□ 0.71
ZC3H4Q9UPT8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 CNN2P8-201ENST00000421872 913 ntBASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 TMEM198B-204ENST00000484016 896 ntBASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 CLUHP6-201ENST00000580789 941 ntBASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 MIR4706-201ENST00000582134 82 ntBASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 AC244669.2-201ENST00000612320 853 ntBASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZC3H4Q9UPT8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 AC134312.5-201ENST00000568031 1313 ntBASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 AC084018.2-201ENST00000613093 2607 ntBASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 AC141586.5-201ENST00000624546 2050 ntBASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 MIR3619-201ENST00000579667 83 ntBASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 AC020914.3-201ENST00000594712 304 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms