Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 AC097493.3-201ENST00000509725 367 ntBASIC15.03■□□□□ -0
NPIPA1Q9UND3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 AL158211.3-201ENST00000607385 239 ntBASIC15.03■□□□□ -0
NPIPA1Q9UND3 AC003101.2-201ENST00000612557 442 ntBASIC15.03■□□□□ -0
NPIPA1Q9UND3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA1Q9UND3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NPIPA1Q9UND3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AC002472.2-201ENST00000442739 958 ntBASIC15.02■□□□□ -0
NPIPA1Q9UND3 UGT1A2P-201ENST00000454886 866 ntBASIC15.02■□□□□ -0
NPIPA1Q9UND3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 TERF1P3-201ENST00000505638 1227 ntBASIC15.02■□□□□ -0
NPIPA1Q9UND3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AC105233.2-201ENST00000523697 349 ntBASIC15.02■□□□□ -0
NPIPA1Q9UND3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AF228730.5-201ENST00000530288 346 ntBASIC15.02■□□□□ -0
NPIPA1Q9UND3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AC190387.1-201ENST00000551683 408 ntBASIC15.02■□□□□ -0
NPIPA1Q9UND3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 AC239800.4-201ENST00000603712 296 ntBASIC15.02■□□□□ -0
NPIPA1Q9UND3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA1Q9UND3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA1Q9UND3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms