Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHA4Q9UN74 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
PCDHA4Q9UN74 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHA4Q9UN74 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHA4Q9UN74 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 MIR4453-201ENST00000584019 89 ntBASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AC003101.2-201ENST00000612557 442 ntBASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AC007967.4-201ENST00000614700 386 ntBASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 LINC02447-202ENST00000501888 2146 ntBASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA4Q9UN74 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 AL691432.1-201ENST00000596308 1422 ntBASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 AC105021.1-202ENST00000570572 669 ntBASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHA4Q9UN74 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 AP001282.1-201ENST00000531301 1499 ntBASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 AL136982.4-201ENST00000437689 1740 ntBASIC18.52■□□□□ 0.55
PCDHA4Q9UN74 AC018695.7-201ENST00000624587 2492 ntBASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 KRT18P28-201ENST00000453838 1332 ntBASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 AL139010.1-201ENST00000454878 894 ntBASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 AC004449.1-201ENST00000564240 433 ntBASIC18.51■□□□□ 0.55
PCDHA4Q9UN74 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 346.1 ms