Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 PTCHD3P3-201ENST00000403073 906 ntBASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AC087163.2-201ENST00000457299 853 ntBASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 MPDU1-223ENST00000582151 728 ntBASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AC006557.2-201ENST00000592985 1240 ntBASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 PPT1-215ENST00000641471 2368 ntBASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB4Q9UN71 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 AC091167.2-201ENST00000579581 588 ntBASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 REXO1L6P-202ENST00000619970 1078 ntBASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB4Q9UN71 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 AC138035.3-201ENST00000622706 2791 ntBASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 LAGE3P1-201ENST00000425356 484 ntBASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 GGTLC5P-201ENST00000617623 998 ntBASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 AP001350.2-201ENST00000625104 1094 ntBASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 AC131009.4-201ENST00000624048 1740 ntBASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGB4Q9UN71 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms