Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 CYP2A7P1-201ENST00000595391 815 ntBASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 AC120114.3-201ENST00000611923 658 ntBASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 AC020765.3-201ENST00000613051 740 ntBASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 IL9RP2-201ENST00000423948 1312 ntBASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 AC104640.1-201ENST00000562617 2109 ntBASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 AC010491.1-201ENST00000563101 2797 ntBASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 REXO1L8P-201ENST00000604378 1897 ntBASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 AL353732.1-201ENST00000569618 1459 ntBASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LIN7CQ9NUP9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
LIN7CQ9NUP9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.23
LIN7CQ9NUP9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
LIN7CQ9NUP9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LIN7CQ9NUP9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.58□□□□□ -0.23
LIN7CQ9NUP9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
LIN7CQ9NUP9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.58□□□□□ -0.24
LIN7CQ9NUP9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms