Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 REXO1L6P-201ENST00000603433 1515 ntBASIC17.16■□□□□ 0.34
TLR9Q9NR96 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 KRT43P-201ENST00000434019 910 ntBASIC17.15■□□□□ 0.34
TLR9Q9NR96 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 CROCCP4-201ENST00000457096 498 ntBASIC17.15■□□□□ 0.34
TLR9Q9NR96 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 AC104989.1-201ENST00000519711 778 ntBASIC17.15■□□□□ 0.34
TLR9Q9NR96 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.15■□□□□ 0.34
TLR9Q9NR96 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TLR9Q9NR96 CYP4F24P-201ENST00000586049 1580 ntBASIC17.15■□□□□ 0.34
TLR9Q9NR96 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
TLR9Q9NR96 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
TLR9Q9NR96 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 HIST3H2BA-201ENST00000436555 524 ntBASIC17.14■□□□□ 0.33
TLR9Q9NR96 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 BTNL10-201ENST00000595971 695 ntBASIC17.14■□□□□ 0.33
TLR9Q9NR96 AL365330.1-201ENST00000607459 531 ntBASIC17.14■□□□□ 0.33
TLR9Q9NR96 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 AD000864.1-201ENST00000624076 2295 ntBASIC17.14■□□□□ 0.33
TLR9Q9NR96 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR9Q9NR96 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.14■□□□□ 0.33
TLR9Q9NR96 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 AL136982.4-201ENST00000437689 1740 ntBASIC17.13■□□□□ 0.33
TLR9Q9NR96 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms