Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 ELL2P1-201ENST00000413990 1906 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 ALG1L5P-201ENST00000482043 771 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 SNHG9-202ENST00000564014 471 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 AC068137.2-201ENST00000605408 478 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 AL078644.1-201ENST00000609881 752 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 ACTL9-202ENST00000612068 1252 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 AL645728.2-201ENST00000641974 660 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 AC144831.1-201ENST00000573312 2656 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 AC068587.6-202ENST00000641839 5619 ntBASIC15.17■□□□□ 0.02
TM9SF2Q99805 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.17■□□□□ 0.02
TM9SF2Q99805 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TM9SF2Q99805 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.16■□□□□ 0.02
TM9SF2Q99805 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 AC254562.1-201ENST00000417586 456 ntBASIC15.16■□□□□ 0.02
TM9SF2Q99805 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 DNAJB3-202ENST00000449667 1266 ntBASIC15.16■□□□□ 0.02
TM9SF2Q99805 CEND1P1-201ENST00000451006 455 ntBASIC15.16■□□□□ 0.02
TM9SF2Q99805 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.16■□□□□ 0.02
TM9SF2Q99805 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TM9SF2Q99805 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF2Q99805 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TM9SF2Q99805 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms