Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC10.84□□□□□ -0.67
LITAFQ99732 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 AL592071.1-201ENST00000611956 408 ntBASIC10.84□□□□□ -0.67
LITAFQ99732 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 AC009090.5-201ENST00000624886 2285 ntBASIC10.84□□□□□ -0.67
LITAFQ99732 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 AC010327.5-201ENST00000586923 3061 ntBASIC10.84□□□□□ -0.67
LITAFQ99732 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.84□□□□□ -0.67
LITAFQ99732 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.84□□□□□ -0.67
LITAFQ99732 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC10.84□□□□□ -0.67
LITAFQ99732 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LITAFQ99732 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
LITAFQ99732 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 AC117489.1-201ENST00000625169 3217 ntBASIC10.83□□□□□ -0.68
LITAFQ99732 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.83□□□□□ -0.68
LITAFQ99732 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 COPE-203ENST00000351079 907 ntTSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC10.83□□□□□ -0.68
LITAFQ99732 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 TSPY7P-201ENST00000431358 1114 ntBASIC10.83□□□□□ -0.68
LITAFQ99732 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC10.83□□□□□ -0.68
LITAFQ99732 S100A2-206ENST00000497140 697 ntTSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC10.83□□□□□ -0.68
LITAFQ99732 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 VENTXP5-201ENST00000523979 775 ntBASIC10.83□□□□□ -0.68
LITAFQ99732 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.83□□□□□ -0.68
LITAFQ99732 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms