Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AC015911.4-201ENST00000588022 1070 ntBASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AP001059.3-201ENST00000619053 235 ntBASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AC084121.4-201ENST00000641598 221 ntBASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AF228730.8-201ENST00000642140 221 ntBASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AC016027.1-202ENST00000607927 1699 ntBASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 HMGN1P19-201ENST00000436976 333 ntBASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 CNN2P2-201ENST00000443536 909 ntBASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 CNN2P3-201ENST00000450201 906 ntBASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 HLA-J-202ENST00000469281 1241 ntBASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 AC109322.1-201ENST00000524499 1264 ntBASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 AC027307.2-201ENST00000591252 911 ntBASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 AL136317.3-201ENST00000618497 906 ntBASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SH3KBP1Q96B97 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 SPDYE7P-202ENST00000420373 878 ntBASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 RBPMS2P1-201ENST00000437762 623 ntBASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 AC067930.6-201ENST00000623257 4947 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms