Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 ARMC10P1-201ENST00000313754 855 ntBASIC15.7■□□□□ 0.1
VPS33AQ96AX1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 HCG4-201ENST00000418983 998 ntBASIC15.7■□□□□ 0.1
VPS33AQ96AX1 SCARNA2-201ENST00000458748 420 ntBASIC15.7■□□□□ 0.1
VPS33AQ96AX1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 RPS15P9-201ENST00000494093 319 ntBASIC15.7■□□□□ 0.1
VPS33AQ96AX1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 LINC02228-204ENST00000642115 2962 ntBASIC15.7■□□□□ 0.1
VPS33AQ96AX1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 PPT1-215ENST00000641471 2368 ntBASIC15.7■□□□□ 0.1
VPS33AQ96AX1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS33AQ96AX1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 AC129492.6-201ENST00000611383 1305 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 AL592424.1-201ENST00000563624 1536 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 AC022532.1-201ENST00000624563 1728 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 MIR648-201ENST00000385046 94 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 MIR3652-201ENST00000579335 131 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 AC006557.2-201ENST00000592985 1240 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 AL121772.3-201ENST00000610840 674 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 REXO1L6P-202ENST00000619970 1078 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.69■□□□□ 0.1
VPS33AQ96AX1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS33AQ96AX1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms