Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 AC004835.2-201ENST00000603762 682 ntBASIC17.47■□□□□ 0.39
SEMA4DQ92854 AC027612.4-201ENST00000605371 583 ntBASIC17.47■□□□□ 0.39
SEMA4DQ92854 AL596442.2-201ENST00000610240 980 ntBASIC17.47■□□□□ 0.39
SEMA4DQ92854 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 AC022188.1-201ENST00000620960 1664 ntBASIC17.46■□□□□ 0.39
SEMA4DQ92854 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 HLA-H-201ENST00000383620 1096 ntBASIC17.46■□□□□ 0.39
SEMA4DQ92854 HAUS4P1-201ENST00000406739 1145 ntBASIC17.46■□□□□ 0.39
SEMA4DQ92854 KRT18P32-201ENST00000424695 1287 ntBASIC17.46■□□□□ 0.39
SEMA4DQ92854 AC245100.5-201ENST00000452108 331 ntBASIC17.46■□□□□ 0.39
SEMA4DQ92854 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 AC132872.4-202ENST00000622924 2756 ntBASIC17.46■□□□□ 0.39
SEMA4DQ92854 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SEMA4DQ92854 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.46■□□□□ 0.39
SEMA4DQ92854 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.38
SEMA4DQ92854 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 PAUPAR-201ENST00000630360 2965 ntBASIC17.45■□□□□ 0.38
SEMA4DQ92854 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 MIR1233-2-201ENST00000408138 82 ntBASIC17.45■□□□□ 0.38
SEMA4DQ92854 MIR1233-1-201ENST00000408722 82 ntBASIC17.45■□□□□ 0.38
SEMA4DQ92854 AC254562.1-201ENST00000417586 456 ntBASIC17.45■□□□□ 0.38
SEMA4DQ92854 CNN2P11-201ENST00000429351 262 ntBASIC17.45■□□□□ 0.38
SEMA4DQ92854 DNAJB3-202ENST00000449667 1266 ntBASIC17.45■□□□□ 0.38
SEMA4DQ92854 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 ALG1L8P-201ENST00000533887 760 ntBASIC17.45■□□□□ 0.38
SEMA4DQ92854 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 RARRES2P9-201ENST00000565168 469 ntBASIC17.45■□□□□ 0.38
SEMA4DQ92854 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SEMA4DQ92854 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SEMA4DQ92854 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SEMA4DQ92854 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.44■□□□□ 0.38
SEMA4DQ92854 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SEMA4DQ92854 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA4DQ92854 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.44■□□□□ 0.38
SEMA4DQ92854 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.44■□□□□ 0.38
SEMA4DQ92854 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.44■□□□□ 0.38
SEMA4DQ92854 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.44■□□□□ 0.38
SEMA4DQ92854 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA4DQ92854 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SEMA4DQ92854 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms